Transcript: lnc-NOS2-5:4

Basic information

LNCipedia transcript ID: lnc-NOS2-5:4 
LNCipedia gene ID: lnc-NOS2-5
Location (hg38): chr17:26999807-27024663
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 410 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT052286; FPKM1_group_12535_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.905 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOS2-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOS2-5:4
4.0 lnc-NOS2-5:4
4.1 lnc-NOS2-5:4
5.0 lnc-NOS2-5:4
5.1 lnc-SLC6A4-135:2
5.2 lnc-NOS2-5:4