Transcript: lnc-NOVA1-4:1

Basic information

LNCipedia transcript ID: lnc-NOVA1-4:1 
LNCipedia gene ID: lnc-NOVA1-4
Location (hg38): chr14:26853115-26854607
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022691; NONHSAT036127
Alternative gene names: XLOC_010982; linc-NOVA1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.7886 non-coding 
CPAT coding probability 17.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOVA1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOVA1-4:1
3.1 lnc-NOVA1-4:1
4.0 lnc-NOVA1-4:1
4.1 lnc-NOVA1-4:1
5.0 lnc-NOVA1-4:1
5.1 lnc-EFS-67:1
5.2 lnc-NOVA1-4:1