Transcript: lnc-NR2F1-6:2

Basic information

LNCipedia transcript ID: lnc-NR2F1-6:2 
LNCipedia gene ID: lnc-NR2F1-6
Ensembl Gene ID: ENSG00000272406
Ensembl Transcript ID: ENST00000606528
Location (hg38): chr5:93741640-93743500
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 548 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606528.1
Alternative gene names: ENSG00000272406.1; RP11-185E12.2; AC108102.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.8871 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR2F1-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NR2F1-6:2
4.0 lnc-NR2F1-6:2
4.1 lnc-NR2F1-6:2
5.0 lnc-NR2F1-6:2
5.1 lnc-GPR150-43:2
5.2 lnc-NR2F1-6:2