Transcript: lnc-NR2F2-2:4

Basic information

LNCipedia transcript ID: lnc-NR2F2-2:4 
LNCipedia gene ID: lnc-NR2F2-2
Ensembl Gene ID: ENSG00000259275
Ensembl Transcript ID: ENST00000558499
Location (hg38): chr15:96354390-96395016
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4856 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000558499.2
Alternative gene names: ENSG00000259275.2; RP11-522B15.3; AC087477.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.24 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR2F2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NR2F2-2:4
4.1 lnc-NR2F2-2:4
5.0 lnc-NR2F2-2:4
5.1 lnc-ARRDC4-41:6
5.2 lnc-NR2F2-2:4