Transcript: lnc-NR4A2-1:1

Basic information

LNCipedia transcript ID: lnc-NR4A2-1:1 
LNCipedia gene ID: lnc-NR4A2-1
Location (hg38): chr2:156317428-156318340
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 348 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005257; NONHSAT075045
Alternative gene names: XLOC_002366; linc-RPRM-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.7866 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR4A2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NR4A2-1:1
3.1 lnc-NR4A2-1:1
4.0 lnc-NR4A2-1:1
4.1 lnc-NR4A2-1:1
5.0 lnc-NR4A2-1:1
5.1 lnc-MMADHC-116:2
5.2 lnc-NR4A2-1:1