Transcript: lnc-OGT-3:1

Basic information

LNCipedia transcript ID: lnc-OGT-3:1 
LNCipedia gene ID: lnc-OGT-3
Location (hg38): chrX:71459740-71460147
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 408 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chrX_4462_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.4057 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OGT-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OGT-3:1
4.0 lnc-OGT-3:1
4.1 lnc-OGT-3:1
5.0 lnc-OGT-3:1
5.1 lnc-CXorf49B-12:1
5.2 lnc-OGT-3:1