Transcript: LINC02186:6

Basic information

LNCipedia transcript ID: LINC02186:6 
HGNC Gene Symbol: LINC02186    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2186
Ensembl Gene ID: ENSG00000261856
Ensembl Transcript ID: ENST00000575767
RefSeq ID: NR_110915
Location (hg38): chr16:14018880-14021077
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 885 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000575767.1; CTD-2135D7.4-001; OTTHUMT00000436618.1; NONHSAT140665; NR_110915; NR_110915.1
Alternative gene names: ENSG00000261856.1; CTD-2135D7.4; OTTHUMG00000177378.1; LINC02186; LOC101927348


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.5263 non-coding 
CPAT coding probability 7.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02186:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARN-5:1
4.0 lnc-PARN-5:1
4.1 lnc-PARN-5:1
5.0 lnc-PARN-5:1
5.1 LINC02186:3
5.2 LINC02186:6