Transcript: lnc-PAWR-5:1

Basic information

LNCipedia transcript ID: lnc-PAWR-5:1 
LNCipedia gene ID: lnc-PAWR-5
Location (hg38): chr12:78422882-78426743
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 618 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020851; NONHSAT029630
Alternative gene names: XLOC_010137; linc-E2F7-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.896 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAWR-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PAWR-2:1
3.1 lnc-PAWR-5:1
4.0 lnc-PAWR-5:1
4.1 lnc-PAWR-5:1
5.0 lnc-PAWR-5:1
5.1 lnc-CCDC59-34:1
5.2 lnc-PAWR-5:1