Transcript: LINC01694:29

Basic information

LNCipedia transcript ID: LINC01694:29 
HGNC Gene Symbol: LINC01694    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1694
Ensembl Gene ID: ENSG00000233922
Ensembl Transcript ID: ENST00000424569
Location (hg38): chr21:45593678-45597091
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 821 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00028862; ENST00000424569; ENST00000424569.1; AL133493.2-001; OTTHUMT00000206833.1; NONHSAT082977
Alternative gene names: XLOC_013985; linc-PCBP3; ENSG00000233922; AL133493.2; ENSG00000233922.1; OTTHUMG00000090408.1; ENSG00000233922.2; LINC01694


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.2009 non-coding 
CPAT coding probability 7.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01694:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PCBP3-1:2
3.1 lnc-PCBP3-1:2
4.0 lnc-PCBP3-1:2
4.1 lnc-PCBP3-1:2
5.0 lnc-PCBP3-1:2
5.1 LINC01694:15
5.2 LINC01694:29