Transcript: lnc-PIEZO2-7:1

Basic information

LNCipedia transcript ID: lnc-PIEZO2-7:1 
LNCipedia gene ID: lnc-PIEZO2-7
Location (hg38): chr18:10244404-10247601
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1961 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026200; NONHSAT057257
Alternative gene names: XLOC_012760; linc-PPP4R1-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.9013 non-coding 
CPAT coding probability 13.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PIEZO2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIEZO2-7:1
3.1 lnc-PIEZO2-7:1
4.0 lnc-PIEZO2-7:1
4.1 lnc-PIEZO2-7:1
5.0 lnc-PIEZO2-7:1
5.1 lnc-SMAD2-299:1
5.2 lnc-PIEZO2-7:1