Transcript: lnc-PLA2G4A-7:1

Basic information

LNCipedia transcript ID: lnc-PLA2G4A-7:1 
LNCipedia gene ID: lnc-PLA2G4A-7
Location (hg38): chr1:189149786-189150729
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 279 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001225; NONHSAT008483
Alternative gene names: XLOC_000502; linc-RGS18-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -259.3233 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLA2G4A-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLA2G4A-6:1
3.1 lnc-PLA2G4A-7:1
4.0 lnc-PLA2G4A-7:1
4.1 lnc-PLA2G4A-7:1
5.0 lnc-PLA2G4A-7:1
5.1 lnc-C1orf21-56:7
5.2 lnc-PLA2G4A-7:1