Transcript: lnc-PLA2G4A-7:3

Basic information

LNCipedia transcript ID: lnc-PLA2G4A-7:3 
LNCipedia gene ID: lnc-PLA2G4A-7
Location (hg38): chr1:189149666-189390262
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1017 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA72:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.139 non-coding 
CPAT coding probability 11.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PLA2G4A-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PLA2G4A-7:3
4.1 lnc-PLA2G4A-7:3
5.0 lnc-PLA2G4A-7:3
5.1 lnc-C1orf21-56:1
5.2 lnc-PLA2G4A-7:3