Transcript: lnc-POTEJ-1:1

Basic information

LNCipedia transcript ID: lnc-POTEJ-1:1 
LNCipedia gene ID: lnc-POTEJ-1
Location (hg38): chr2:130666566-130679901
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10397 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003872; NONHSAT074361
Alternative gene names: XLOC_001671; linc-GPR148-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 70.1442 coding 
CPAT coding probability 39.08% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-POTEJ-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POTEJ-1:1
3.1 lnc-POTEJ-1:1
4.0 lnc-POTEJ-1:1
4.1 lnc-POTEJ-1:1
5.0 lnc-POTEJ-1:1
5.1 lnc-GPR17-45:1
5.2 lnc-POTEJ-1:1