Transcript: LINC02366:9

Basic information

LNCipedia transcript ID: LINC02366:9 
HGNC Gene Symbol: LINC02366    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2366
Ensembl Gene ID: ENSG00000256888
Ensembl Transcript ID: ENST00000540188
Location (hg38): chr12:10769421-10777439
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 471 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000540188; ENST00000540188.1; RP13-81N3.2-003; OTTHUMT00000399903.1; NONHSAT026900
Alternative gene names: ENSG00000256888; RP13-81N3.2; ENSG00000256888.1; OTTHUMG00000168488.1; ENSG00000256888.5; LINC02366


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -171.7493 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02366:9 no no no no

Available literature

  1. van den Berg (2016), Meta-analysis of Genome-Wide Association Studies for Extraversion: Findings from the Genetics of Personality Consortium., Behav. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRH2-1:3
3.1 lnc-PRH2-1:3
4.0 lnc-PRH2-1:3
4.1 lnc-PRH2-1:3
5.0 lnc-PRH2-1:3
5.1 LINC02366:5
5.2 LINC02366:9