Transcript: LINC02282:5

Basic information

LNCipedia transcript ID: LINC02282:5 
HGNC Gene Symbol: LINC02282    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2282
Ensembl Gene ID: ENSG00000257056
Ensembl Transcript ID: ENST00000535153
RefSeq ID: NR_135255
Location (hg38): chr14:28783491-28785787
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1655 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000535153; ENST00000535153.2; RP11-966I7.2-001; OTTHUMT00000408611.1; NONHSAT140156; NR_135255.1
Alternative gene names: ENSG00000257056; RP11-966I7.2; ENSG00000257056.2; OTTHUMG00000170346.1; LINC02282; LOC105370424


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -171.4856 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02282:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRKD1-7:1
3.1 lnc-PRKD1-7:1
4.0 lnc-PRKD1-7:1
4.1 lnc-PRKD1-7:1
5.0 lnc-PRKD1-7:1
5.1 LINC02282:3
5.2 LINC02282:5