Transcript: lnc-PXDC1-1:5

Basic information

LNCipedia transcript ID: lnc-PXDC1-1:5 
LNCipedia gene ID: lnc-PXDC1-1
Location (hg38): chr6:3593754-3595675
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 891 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT107167
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.2288 non-coding 
CPAT coding probability 2.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXDC1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PXDC1-1:5
4.0 lnc-PXDC1-1:5
4.1 lnc-PXDC1-1:5
5.0 lnc-PXDC1-1:5
5.1 lnc-ECI2-37:7
5.2 lnc-PXDC1-1:5