Transcript: lnc-PYGL-1:2

Basic information

LNCipedia transcript ID: lnc-PYGL-1:2 
LNCipedia gene ID: lnc-PYGL-1
Location (hg38): chr14:50956326-50962002
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4647 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000553648
Alternative gene names: ENSG00000258711; RP11-218E20.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 57.8771 non-coding 
CPAT coding probability 6.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PYGL-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PYGL-1:2
3.1 lnc-PYGL-1:2
4.0 lnc-PYGL-1:2
4.1 lnc-PYGL-1:2
5.0 lnc-PYGL-1:2
5.1 lnc-RTN1-103:2
5.2 lnc-PYGL-1:2