Transcript: lnc-REEP3-9:1

Basic information

LNCipedia transcript ID: lnc-REEP3-9:1 
LNCipedia gene ID: lnc-REEP3-9
Location (hg38): chr10:65023973-65024666
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 356 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT013630; FPKM1_group_3404_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.2853 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-REEP3-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-REEP3-9:1
4.0 lnc-REEP3-9:1
4.1 lnc-REEP3-9:1
5.0 lnc-REEP3-9:1
5.1 lnc-MTRNR2L5-56:1
5.2 lnc-REEP3-9:1