Transcript: lnc-RNASE1-1:2

Basic information

LNCipedia transcript ID: lnc-RNASE1-1:2 
LNCipedia gene ID: lnc-RNASE1-1
Location (hg38): chr14:20872920-20875745
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2126 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022669; NONHSAT035613
Alternative gene names: XLOC_010966; linc-RNASE1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.737 non-coding 
CPAT coding probability 11.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNASE1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNASE1-1:1
3.1 lnc-RNASE1-1:2
4.0 lnc-RNASE1-1:2
4.1 lnc-RNASE1-1:2
5.0 lnc-RNASE1-1:2
5.1 lnc-ZNF219-13:2
5.2 lnc-RNASE1-1:2