Transcript: lnc-NEIL3-3:4

Basic information

LNCipedia transcript ID: lnc-NEIL3-3:4 
LNCipedia gene ID: lnc-NEIL3-3
Location (hg38): chr4:179170864-179306782
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 234 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008353; NONHSAT099408
Alternative gene names: XLOC_003799; linc-ODZ3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.0425 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NEIL3-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-389E17.1.1-3:1
3.1 lnc-RP11-389E17.1.1-3:1
4.0 lnc-RP11-389E17.1.1-3:1
4.1 lnc-RP11-389E17.1.1-3:1
5.0 lnc-RP11-389E17.1.1-3:1
5.1 lnc-GALNTL6-55:2
5.2 lnc-NEIL3-3:4