Transcript: lnc-TMEM183A-5:1

Basic information

LNCipedia transcript ID: lnc-TMEM183A-5:1 
LNCipedia gene ID: lnc-TMEM183A-5
Location (hg38): chr1:202861751-202874723
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1726 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT008857
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
IITNWDDMEK 100% sense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score 49.8557 non-coding 
CPAT coding probability 62.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM183A-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-480I12.4.1-5:2
4.0 lnc-RP11-480I12.4.1-5:2
4.1 lnc-RP11-480I12.4.1-5:2
5.0 lnc-RP11-480I12.4.1-5:2
5.1 lnc-ADORA1-8:1
5.2 lnc-TMEM183A-5:1