Transcript: lnc-NUDT4-10:3

Basic information

LNCipedia transcript ID: lnc-NUDT4-10:3 
LNCipedia gene ID: lnc-NUDT4-10
Ensembl Gene ID: ENSG00000257746
Ensembl Transcript ID: ENST00000551928
Location (hg38): chr12:93090522-93107600
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 791 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551928; ENST00000551928.1; RP11-202G11.2-001; OTTHUMT00000407315.1; NONHSAT029916
Alternative gene names: ENSG00000257746; RP11-202G11.2; ENSG00000257746.1; OTTHUMG00000170113.1; AC138123.3; AC138123.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.9301 non-coding 
CPAT coding probability 21.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUDT4-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-511B23.3.1-2:3
3.1 lnc-RP11-511B23.3.1-2:3
4.0 lnc-RP11-511B23.3.1-2:3
4.1 lnc-RP11-511B23.3.1-2:3
5.0 lnc-RP11-511B23.3.1-2:3
5.1 lnc-PLEKHG7-3:3
5.2 lnc-NUDT4-10:3