Transcript: lnc-RPL39L-3:1

Basic information

LNCipedia transcript ID: lnc-RPL39L-3:1 
LNCipedia gene ID: lnc-RPL39L-3
Location (hg38): chr3:187035951-187042771
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6821 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1024:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.7446 non-coding 
CPAT coding probability 5.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL39L-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RPL39L-3:1
4.1 lnc-RPL39L-3:1
5.0 lnc-RPL39L-3:1
5.1 lnc-TBCCD1-12:1
5.2 lnc-RPL39L-3:1