Transcript: lnc-RTN4IP1-3:1

Basic information

LNCipedia transcript ID: lnc-RTN4IP1-3:1 
LNCipedia gene ID: lnc-RTN4IP1-3
Location (hg38): chr6:106465259-106466410
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 414 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT114240
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -358.6495 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RTN4IP1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTN4IP1-3:1
4.0 lnc-RTN4IP1-3:1
4.1 lnc-RTN4IP1-3:1
5.0 lnc-RTN4IP1-3:1
5.1 lnc-SNX3-22:1
5.2 lnc-RTN4IP1-3:1