Transcript: lnc-SDSL-1:1

Basic information

LNCipedia transcript ID: lnc-SDSL-1:1 
LNCipedia gene ID: lnc-SDSL-1
Location (hg38): chr12:113409887-113414044
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 643 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020565; NONHSAT030845
Alternative gene names: XLOC_009884; linc-SDSL


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.8419 non-coding 
CPAT coding probability 8.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SDSL-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SDSL-1:1
3.1 lnc-SDSL-1:1
4.0 lnc-SDSL-1:1
4.1 lnc-SDSL-1:1
5.0 lnc-SDSL-1:1
5.1 lnc-PLBD2-1:3
5.2 lnc-SDSL-1:1