Transcript: lnc-SLC15A4-18:1

Basic information

LNCipedia transcript ID: lnc-SLC15A4-18:1 
LNCipedia gene ID: lnc-SLC15A4-18
Location (hg38): chr12:128437778-128439206
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 736 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT031915
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.5007 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC15A4-18:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC15A4-18:1
4.0 lnc-SLC15A4-18:1
4.1 lnc-SLC15A4-18:1
5.0 lnc-SLC15A4-18:1
5.1 lnc-RIMBP2-29:1
5.2 lnc-SLC15A4-18:1