Transcript: lnc-SLC20A1-3:1

Basic information

LNCipedia transcript ID: lnc-SLC20A1-3:1 
LNCipedia gene ID: lnc-SLC20A1-3
Location (hg38): chr2:112664878-112665240
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT073720; FPKM1_group_16939_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.0266 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC20A1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC20A1-3:1
4.0 lnc-SLC20A1-3:1
4.1 lnc-SLC20A1-3:1
5.0 lnc-SLC20A1-3:1
5.1 lnc-SULT1C4-66:1
5.2 lnc-SLC20A1-3:1