Transcript: LINC02040:6

Basic information

LNCipedia transcript ID: LINC02040:6 
LNCipedia gene ID: LINC02040
Location (hg38): chr3:65174960-65193504
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 609 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006074; NONHSAT090284
Alternative gene names: XLOC_002688; linc-SLC25A26-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -232.4658 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02040:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC25A26-2:2
3.1 lnc-SLC25A26-3:2
4.0 lnc-SLC25A26-3:2
4.1 lnc-SLC25A26-3:2
5.0 lnc-SLC25A26-3:2
5.1 LINC02040:3
5.2 LINC02040:6