Transcript: lnc-SLC29A1-2:1

Basic information

LNCipedia transcript ID: lnc-SLC29A1-2:1 
LNCipedia gene ID: lnc-SLC29A1-2
Location (hg38): chr6:44236976-44240582
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3607 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT112955
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.2846 non-coding 
CPAT coding probability 16.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC29A1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC29A1-2:1
4.0 lnc-SLC29A1-2:1
4.1 lnc-SLC29A1-2:1
5.0 lnc-SLC29A1-2:1
5.1 lnc-TREML4-78:1
5.2 lnc-SLC29A1-2:1