Transcript: lnc-SLITRK5-32:1

Basic information

LNCipedia transcript ID: lnc-SLITRK5-32:1 
LNCipedia gene ID: lnc-SLITRK5-32
Location (hg38): chr13:84520103-84521568
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1466 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT034551
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.7908 non-coding 
CPAT coding probability 1.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLITRK5-32:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLITRK5-32:1
4.0 lnc-SLITRK5-32:1
4.1 lnc-SLITRK5-32:1
5.0 lnc-SLITRK5-32:1
5.1 lnc-COL4A2-182:1
5.2 lnc-SLITRK5-32:1