Transcript: LINC00391:9

Basic information

LNCipedia transcript ID: LINC00391:9 
LNCipedia gene ID: LINC00391
Location (hg38): chr13:94705700-94707310
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1436 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022087; NONHSAT034738
Alternative gene names: XLOC_010695; linc-TGDS-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.9271 non-coding 
CPAT coding probability 10.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00391:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SOX21-1:2
3.1 lnc-SOX21-1:2
4.0 lnc-SOX21-1:2
4.1 LINC00391:9
5.0 LINC00391:9
5.1 LINC00391:9
5.2 LINC00391:9

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