Transcript: lnc-SPAG1-4:3

Basic information

LNCipedia transcript ID: lnc-SPAG1-4:3 
LNCipedia gene ID: lnc-SPAG1-4
Location (hg38): chr8:100618542-100620005
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 500 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT128010
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.5184 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAG1-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPAG1-4:3
4.0 lnc-SPAG1-4:3
4.1 lnc-SPAG1-4:3
5.0 lnc-SPAG1-4:3
5.1 lnc-CA2-164:1
5.2 lnc-SPAG1-4:3