Transcript: lnc-SPAG1-4:4

Basic information

LNCipedia transcript ID: lnc-SPAG1-4:4 
LNCipedia gene ID: lnc-SPAG1-4
Location (hg38): chr8:100618542-100620005
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 502 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT128011
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.8669 non-coding 
CPAT coding probability 1.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAG1-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPAG1-4:4
4.0 lnc-SPAG1-4:4
4.1 lnc-SPAG1-4:4
5.0 lnc-SPAG1-4:4
5.1 lnc-CA2-164:2
5.2 lnc-SPAG1-4:4