Transcript: THUMPD3-AS1:78

Basic information

LNCipedia transcript ID: THUMPD3-AS1:78 
LNCipedia gene ID: THUMPD3-AS1
Location (hg38): chr3:9324690-9371654
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3252 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003brm_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.1823 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THUMPD3-AS1:78 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRGAP3-2:1
4.0 lnc-SRGAP3-2:1
4.1 THUMPD3-AS1:78
5.0 THUMPD3-AS1:78
5.1 THUMPD3-AS1:78
5.2 THUMPD3-AS1:78

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