Transcript: lnc-SSTR4-4:4

Basic information

LNCipedia transcript ID: lnc-SSTR4-4:4 
LNCipedia gene ID: lnc-SSTR4-4
Location (hg38): chr20:22685669-22728473
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 311 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00028517
Alternative gene names: XLOC_013486; linc-SSTR4-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1021.4661 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SSTR4-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SSTR4-3:4
3.1 lnc-SSTR4-4:4
4.0 lnc-SSTR4-4:4
4.1 lnc-SSTR4-4:4
5.0 lnc-SSTR4-4:4
5.1 lnc-CST8-25:8
5.2 lnc-SSTR4-4:4