Transcript: lnc-TARDBP-6:1

Basic information

LNCipedia transcript ID: lnc-TARDBP-6:1 
LNCipedia gene ID: lnc-TARDBP-6
Location (hg38): chr1:10952345-10953115
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 771 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_chen_BX107168_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.9195 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TARDBP-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TARDBP-6:1
4.0 lnc-TARDBP-6:1
4.1 lnc-TARDBP-6:1
5.0 lnc-TARDBP-6:1
5.1 lnc-KIF1B-29:1
5.2 lnc-TARDBP-6:1