Transcript: lnc-TERF2IP-6:1

Basic information

LNCipedia transcript ID: lnc-TERF2IP-6:1 
LNCipedia gene ID: lnc-TERF2IP-6
Location (hg38): chr16:75792378-75848437
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 56060 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_BE253544_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 61.4789 coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TERF2IP-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TERF2IP-6:1
4.0 lnc-TERF2IP-6:1
4.1 lnc-TERF2IP-6:1
5.0 lnc-TERF2IP-6:1
5.1 lnc-MARVELD3-83:1
5.2 lnc-TERF2IP-6:1

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