Transcript: lnc-IRAK1-3:1

Basic information

LNCipedia transcript ID: lnc-IRAK1-3:1 
LNCipedia gene ID: lnc-IRAK1-3
Location (hg38): chrX:154105928-154106175
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 248 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chrX_9177_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -159.4026 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRAK1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TEX28P2-1:1
4.0 lnc-TEX28P2-1:1
4.1 lnc-TEX28P2-1:1
5.0 lnc-TEX28P2-1:1
5.1 lnc-CTAG1B-17:1
5.2 lnc-IRAK1-3:1

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