Transcript: lnc-TMEM120B-1:5

Basic information

LNCipedia transcript ID: lnc-TMEM120B-1:5 
LNCipedia gene ID: lnc-TMEM120B-1
Location (hg38): chr12:121687250-121690359
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 361 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT031436
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.7456 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM120B-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM120B-2:1
4.0 lnc-TMEM120B-2:1
4.1 lnc-TMEM120B-1:5
5.0 lnc-TMEM120B-1:5
5.1 lnc-PSMD9-15:4
5.2 lnc-TMEM120B-1:5