Transcript: lnc-TMEM132E-2:1

Basic information

LNCipedia transcript ID: lnc-TMEM132E-2:1 
LNCipedia gene ID: lnc-TMEM132E-2
Location (hg38): chr17:34473794-34476110
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025354; NONHSAT053027
Alternative gene names: XLOC_012175; linc-TMEM132E-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -277.3972 non-coding 
CPAT coding probability 11.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM132E-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM132E-2:1
3.1 lnc-TMEM132E-2:1
4.0 lnc-TMEM132E-2:1
4.1 lnc-TMEM132E-2:1
5.0 lnc-TMEM132E-2:1
5.1 lnc-NSRP1-109:1
5.2 lnc-TMEM132E-2:1