Transcript: lnc-TMEM8B-1:3

Basic information

LNCipedia transcript ID: lnc-TMEM8B-1:3 
LNCipedia gene ID: lnc-TMEM8B-1
RefSeq ID: NR_024006
Location (hg38): chr9:35860274-35865518
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5245 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT130989; NR_024006; NR_024006.1
Alternative gene names: LINC00950


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.6146 non-coding 
CPAT coding probability 19.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM8B-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM8B-1:3
4.0 lnc-TMEM8B-1:3
4.1 lnc-TMEM8B-1:3
5.0 lnc-TMEM8B-1:3
5.1 lnc-RECK-2:2
5.2 lnc-TMEM8B-1:3