Transcript: lnc-TMSB15A-3:1

Basic information

LNCipedia transcript ID: lnc-TMSB15A-3:1 
LNCipedia gene ID: lnc-TMSB15A-3
Location (hg38): chrX:102605081-102607319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2239 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ncRnaDb_ncrna_FR056191_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.2918 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMSB15A-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMSB15A-3:1
4.0 lnc-TMSB15A-3:1
4.1 lnc-TMSB15A-3:1
5.0 lnc-TMSB15A-3:1
5.1 lnc-RAB40A-24:1
5.2 lnc-TMSB15A-3:1