Transcript: lnc-TPPP-2:2

Basic information

LNCipedia transcript ID: lnc-TPPP-2:2 
LNCipedia gene ID: lnc-TPPP-2
RefSeq ID: NR_103444
Location (hg38): chr5:602169-612210
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1042 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT099898; NR_103444; NR_103444.1
Alternative gene names: LOC100996325


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.791 non-coding 
CPAT coding probability 9.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPPP-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPPP-2:2
4.0 lnc-TPPP-2:2
4.1 lnc-TPPP-2:2
5.0 lnc-TPPP-2:2
5.1 lnc-IRX2-42:2
5.2 lnc-TPPP-2:2