Transcript: lnc-TPRA1-5:1

Basic information

LNCipedia transcript ID: lnc-TPRA1-5:1 
LNCipedia gene ID: lnc-TPRA1-5
Location (hg38): chr3:127283846-127288025
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1001 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT091716
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.0988 non-coding 
CPAT coding probability 96.50% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TPRA1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPRA1-5:1
4.0 lnc-TPRA1-5:1
4.1 lnc-TPRA1-5:1
5.0 lnc-TPRA1-5:1
5.1 lnc-MGLL-9:1
5.2 lnc-TPRA1-5:1