Transcript: lnc-TRIM49D2-3:1

Basic information

LNCipedia transcript ID: lnc-TRIM49D2-3:1 
LNCipedia gene ID: lnc-TRIM49D2-3
Location (hg38): chr11:89944035-89949402
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3915 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT023570
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.8931 non-coding 
CPAT coding probability 24.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM49D2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM49L2-3:1
4.0 lnc-TRIM49L2-3:1
4.1 lnc-TRIM49L2-3:1
5.0 lnc-TRIM49L2-3:1
5.1 lnc-TRIM64-3:1
5.2 lnc-TRIM49D2-3:1

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