Transcript: lnc-TRIM75P-3:1

Basic information

LNCipedia transcript ID: lnc-TRIM75P-3:1 
LNCipedia gene ID: lnc-TRIM75P-3
Location (hg38): chr4:165096634-165116973
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2422 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003iqv_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.7505 non-coding 
CPAT coding probability 25.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM75P-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM60-3:1
4.0 lnc-TRIM60-3:1
4.1 lnc-TRIM60-3:1
5.0 lnc-TRIM60-3:1
5.1 lnc-CLCN3-30:1
5.2 lnc-TRIM75P-3:1