Transcript: lnc-TSN-8:1

Basic information

LNCipedia transcript ID: lnc-TSN-8:1 
LNCipedia gene ID: lnc-TSN-8
Location (hg38): chr2:122738265-122748433
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 345 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003846; NONHSAT074081
Alternative gene names: XLOC_001651; linc-CNTNAP5-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.5999 non-coding 
CPAT coding probability 6.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSN-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSN-6:1
3.1 lnc-TSN-8:1
4.0 lnc-TSN-8:1
4.1 lnc-TSN-8:1
5.0 lnc-TSN-8:1
5.1 lnc-TMEM37-39:1
5.2 lnc-TSN-8:1