Transcript: lnc-TSN-9:2

Basic information

LNCipedia transcript ID: lnc-TSN-9:2 
LNCipedia gene ID: lnc-TSN-9
Location (hg38): chr2:122884701-122887225
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1018 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074090; FPKM1_group_17134_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.1498 non-coding 
CPAT coding probability 4.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSN-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSN-9:2
4.0 lnc-TSN-9:2
4.1 lnc-TSN-9:2
5.0 lnc-TSN-9:2
5.1 lnc-TMEM37-42:1
5.2 lnc-TSN-9:2