Transcript: lnc-TTLL9-1:1

Basic information

LNCipedia transcript ID: lnc-TTLL9-1:1 
LNCipedia gene ID: lnc-TTLL9-1
Ensembl Gene ID: ENSG00000278012
Ensembl Transcript ID: ENST00000616850
Location (hg38): chr20:31970181-31970831
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 651 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616850.1
Alternative gene names: ENSG00000278012.1; RP1-310O13.13; AL031658.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -131.9471 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTLL9-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TTLL9-1:1
4.1 lnc-TTLL9-1:1
5.0 lnc-TTLL9-1:1
5.1 lnc-BPIFB2-21:1
5.2 lnc-TTLL9-1:1