Transcript: lnc-UBAC1-1:1

Basic information

LNCipedia transcript ID: lnc-UBAC1-1:1 
LNCipedia gene ID: lnc-UBAC1-1
Location (hg38): chr9:135926354-135931275
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2386 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_2303_NR_024580
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 145.7417 coding 
CPAT coding probability 98.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-UBAC1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBAC1-1:1
4.0 lnc-UBAC1-1:1
4.1 lnc-UBAC1-1:1
5.0 lnc-UBAC1-1:1
5.1 lnc-UBAC1-1:1
5.2 lnc-UBAC1-1:1